genomtype

Genomtype is a term occasionally used in genetics and genomics to denote the genome-wide genetic constitution of an organism, cell line, or clone. It encompasses the complete set of genetic variants and structural features that characterize a genome, including single-nucleotide polymorphisms, insertions and deletions, copy-number variations, gene content, and the arrangement of elements such as mobile genetic elements. The term is not widely standardized and may be used as a synonym for genotype or as a broader description of a genome’s organization.

In practice, genomtype can be used in microbial typing, where researchers classify strains based on entire genome variation rather than a small set of loci, or in cancer genomics to describe a tumor’s genome-wide profile, including mutation signatures, copy-number alterations, and structural rearrangements. In population and evolutionary genomics, genomtype can refer to the ancestral and derived genome configurations of individuals within a population.

Relation to related terms: Genotype typically refers to the genetic makeup at specified loci or across the genome, while genome type can denote general categories of genome organization. Genomtype emphasizes the genome as a full data object derived from sequencing, often used in analyses that integrate multiple classes of variants.

See also: Genotype, Genome, Haplotype, Pan-genome, Copy-number variation, Whole-genome sequencing.