alcoholfixed

Alcoholfixed refers to biological specimens that have been preserved using alcohol-based fixatives, typically ethanol, methanol, or isopropanol, rather than standard cross-linking fixatives such as formaldehyde. This method causes coagulative fixation by protein precipitation and dehydration, which generally preserves many cellular details while altering lipid content and tissue dimensions.

Common practice involves immersion of the specimen in 70% ethanol for a period sufficient to halt enzymatic activity, followed by processing for paraffin embedding or preparing cytology smears. Some protocols use higher concentrations or methanol-based fixatives. Alcohol-fixed tissues are often processed with rehydration steps before staining or with alternative downstream methods suitable for nucleic acid analysis and certain antigen detection.

Advantages of alcohol fixation include rapid fixation, relative safety compared to formaldehyde, and improved preservation of some antigens and nucleic acids, making it suitable for cytology and molecular studies. It can also be preferable when formalin-induced cross-linking interferes with downstream assays.

Limitations include tissue shrinkage and hardening, potential loss of lipids and delicate cytoplasmic features, and variability in staining quality. Not all tissues fix well with alcohol, and performance varies by downstream method. Alcohol-fixed samples may require different histochemical or immunohistochemical protocols and may be less compatible with traditional paraffin-embedded H&E staining unless rehydrated processing is used.