Vsearch
Vsearch is an open-source, multi-threaded search engine written in C++. It is designed to be a simple and efficient tool for searching and counting occurrences of a specific pattern in a set of files or strings. The software is distributed under the terms of the GNU Lesser General Public License (LGPL).
Vsearch features a number of advanced algorithms and techniques to optimize its search performance, including suffix
One of the primary uses of Vsearch is for searching for specific sequences of nucleotides, or "reads",
In addition to its bioinformatics applications, Vsearch can also be used in other domains to perform searches
The Vsearch software is primarily developed and maintained by the WashU Epigenome Center, a research institution