MZmine
MZmine is an open-source software platform for processing mass spectrometry data, with a focus on untargeted metabolomics analyses. Written in Java, it runs on Windows, macOS, and Linux, and is designed to be modular and extensible through a plug-in architecture. The project is community-driven and maintained with an active user base, and its source code and documentation are hosted on a public repository.
MZmine supports common mass spectrometry data types produced in LC-MS and GC-MS experiments, including tandem MS
MZmine supports multiple data formats such as mzML and mzXML and can read vendor data via wrapper
In sum, MZmine provides a free, user-friendly platform for processing and analyzing mass spectrometry data, enabling