MSTtuki

MSTtuki is a software tool designed for the analysis of mass spectrometry data. It is particularly well-suited for the processing of data from mass spectrometry imaging (MSI) experiments, which involve the spatial mapping of biomolecules within tissue sections. MSTtuki provides a comprehensive suite of tools for data preprocessing, peak detection, and visualization, enabling researchers to extract meaningful biological insights from their MSI data.

The software is developed by the Institute for Systems Biology and is available as open-source software, allowing researchers to access and modify the code to suit their specific needs. MSTtuki supports various file formats commonly used in mass spectrometry, including mzML, mzXML, and imzML, ensuring compatibility with a wide range of instruments and data acquisition methods.

One of the key features of MSTtuki is its ability to perform automated peak detection and alignment, which is crucial for the accurate identification and quantification of biomolecules in MSI data. The software also includes tools for data normalization and statistical analysis, enabling researchers to compare different experimental conditions and identify significant differences in biomolecule distribution.

MSTtuki's user-friendly interface and extensive documentation make it accessible to both novice and experienced users. The software is regularly updated to incorporate the latest advancements in mass spectrometry data analysis, ensuring that researchers have access to state-of-the-art tools for their work. Overall, MSTtuki is a valuable resource for researchers working in the field of mass spectrometry imaging, providing them with the tools needed to unlock the full potential of their data.