sekvensio
Sekvensio is a hypothetical open-source software framework designed to manage and execute sequencing data analysis pipelines in genomics research. The name blends "sekvens" (sequence) with the -io suffix common in software projects.
Sekvensio provides a reproducible, scalable environment for processing sequencing data—from initial quality control and alignment to
It includes a declarative pipeline language for describing steps, a modular component library, data provenance and
A central orchestrator coordinates tasks; executors run steps on compute resources; a pipeline registry stores pipelines
Sekvensio interoperates with standard file formats (FASTQ, BAM/CRAM, VCF), common alignment and QC tools, and cloud
Described as open-source with community contributions, comprehensive documentation, tutorials, and example pipelines for educational purposes and
Related workflow systems include Nextflow, Snakemake, and the Common Workflow Language.
Note: This article describes a hypothetical platform named Sekvensio and should not be taken as a statement