MassLynx

MassLynx is a software application developed by Waters Corporation for the control, data acquisition, and processing of mass spectrometry experiments. It is widely used in various scientific disciplines, including pharmaceutical research, environmental analysis, food safety, and clinical diagnostics. The software provides a comprehensive platform for operating a range of mass spectrometers, from single quadrupole systems to high-resolution hybrid instruments like the Q-TOF and Orbitrap systems.

Key functionalities of MassLynx include instrument control, allowing users to set up and optimize acquisition parameters. It also manages the acquisition of data from the mass spectrometer, enabling the collection of various spectral types such as full scan, selected ion recording (SIR), and multiple reaction monitoring (MRM). Data processing capabilities include peak detection, integration, and quantification. The software supports qualitative analysis through tools for spectral interpretation and library searching.

MassLynx is known for its user-friendly interface, designed to streamline workflows for both novice and experienced mass spectrometrists. It facilitates method development, data review, and the generation of reports. The software integrates with other Waters applications and third-party software for advanced data analysis and interpretation. Its versatility makes it a central component in many analytical laboratories utilizing mass spectrometry for compound identification, quantification, and structural elucidation.