IgV

IGV, also known as Integrative Genomics Viewer, is a software tool used for visualizing and analyzing genomic data. Developed at the Broad Institute of MIT and Harvard, IGV is designed to integrate data from various sources, including Next-Generation Sequencing (NGS) and microarray data, to enable accurate and comprehensive analysis of genomic regions.

The software is widely used in the field of genomics research, genome assembly, and comparative genomics. IGV enables users to explore large genomic datasets by providing an intuitive graphical interface that supports sub-set selection, annotation, and alignment of genomic data. Users can visualize data from various sources, including DNA sequences, gene expression, and epigenetic modifications.

One of the key features of IGV is its ability to handle large-scale genomic data with high-speed and efficiency. The software can display data from various chromosomes, modify the data resolution, and zoom in or out of specific regions of interest. Additionally, IGV allows users to perform basic data analysis tasks, including computation of genomic waveforms, removal of duplicate reads, and quantification of gene expression.

IGV is available as a free, open-source platform, accessible on multiple operating systems, including Windows, macOS, and Linux. The software is maintained by the Broad Institute and has become a widely used standard tool in the field of genomics research. Overall, IGV has simplified the complex process of genomic data visualization and analysis, empowering researchers to explore and interpret large-scale genomic data with ease.

IGV's user-friendly interface and advanced features have made it a valuable resource for researchers, clinicians, and computational biologists in academia, government, and industry alike.